The latest news from The Hyve on Open Source solutions for bioinformatics

Quisper for scientifically accurate food advice

July 20, 2018 | By Joris Borgdorff 0
What is a healthy diet? The claims about good food made by journalists, food bloggers and dieticians are often contradictory. It’s no wonder many people are at a loss what a balanced diet should look like. The Quisper platform wants to unlock the[…]
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FAIR moves on from theory to practice

July 18, 2018 | By Jolanda Strubel 0
At the Bio-IT World conference, held May 15-17 in Boston, the track on FAIR data saw a fair number of Dutch speakers present on the FAIR data initiative. Prof. Barend Mons, scientific director of the GO FAIR international support and coordination[…]
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Easy data import into tranSMART using the Arborist and tranSMART toolkit

July 04, 2018 | By Ward Weistra 0
Even for data scientists and researchers who are experienced tranSMART users, loading data into this data warehouse can be a complicated task. Therefore, The Hyve developed two tools, the Arborist and the tmtk (tranSMART toolkit), to make it easier[…]
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Gene set visualization in the new cBioPortal OncoPrint

June 20, 2018 | By Sander Tan 0
The Hyve recently added gene set scoring visualization to cBioPortal OncoPrint. To give you an example, we created our own instance that has the TCGA glioblastoma dataset loaded with gene sets identified by Roel Verhaak and colleagues. Using the[…]
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Boston’s Bio-IT World conference revisited

May 23, 2018 | By Jolanda Strubel 0
Looking back at a successful Bio-IT World conference in Boston, May 15-17, we’d like to give you an impression of The Hyve’s contribution to this year’s event.
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Easy and secure study management via RADAR-base

May 16, 2018 | By Nivethika Mahasivam 0
The RADAR-base Management Portal is a one-stop shop for managing remote patient monitoring studies. . The portal is designed to facilitate easy and secure management of studies and data collected by wearable devices.
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Improved display of Germline mutations

May 14, 2018 | By Sander Tan 2
    The Hyve recently developed visualization for germline mutations in cBioPortal OncoPrint. This feature was sponsored by AstraZeneca and has been shared with the community on www.cbioportal.org and on cBioPortal GitHub.   Use case Inherited[…]
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Pan-European Health Data Networks Meeting

May 14, 2018 | By Kees van Bochove 0
Last Wednesday, we held a meeting hosted by HealthRI at NKI in Amsterdam with representatives from several European health data networks that either have recently started or will soon start. Most of these networks are funded by national governments,[…]
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Highlights webinar on health data research infrastructures

April 13, 2018 | By Jolanda Strubel 0
The Hyve has started a new activity: webinars. Our first episode was on health data research infrastructures. This topic has been attracting a lot of attention recently. For instance, in Germany or Switzerland the government decided to invest in a[…]
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How to transform European patient data to the OMOP Common Data Model

March 19, 2018 | By Maxim Moinat 0
The first OHDSI Symposium in Europe will be held in Rotterdam (NL) on March 23 2018, hosted by the Erasmus Medical Centre. As with previous international OHDSI symposiums, Maxim and Kees will attend the meeting. Stefan, Julia, Irina, and Marinel[…]
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