The latest news from The Hyve on Open Source solutions for bioinformatics

Simple data loading into cBioPortal with Docker (Updated 2019)

December 28, 2017 | By Diana Baiceanu 4
In our recent blogpost we discussed an easy solution to set up a local instance of cBioPortal using Docker. The next step is to load a study into the database. In cBioPortal Datahub, there are plenty of public studies that have staging files[…]
[ Read more ]

Health-RI conference 2017: building on a strong foundation

December 21, 2017 | By Maxim Moinat 0
The aim of the third Health-RI (Research Infrastructure) conference, held on 8 December 2017, was to highlight the challenges in bridging the gap between research and medical practice.  Although many challenges still lay ahead, we are delighted to[…]
[ Read more ]

cBioPortal setup made easy using Docker (Updated 2019)

December 13, 2017 | By Diana Baiceanu 12
The easiest way to install and run cBioPortal is by using Docker. Below are the commands needed to easily install and configure all its dependencies and prerequisites.
[ Read more ]

Where your OHDSI journey may bring you

November 30, 2017 | By Irina Pulyakhina 0
One of the solutions that can greatly help you in your research on observational data is OHDSI, an open source platform for Observational Health Data Sciences and Informatics (see this page for an introduction to OHDSI and the concept of[…]
[ Read more ]

Your data is safe with us

November 22, 2017 | By Irina Pulyakhina 0
As of the of 30th of October 2017 The Hyve is ISO 27001 certified. This means that we comply with the security requirements of the ISO 27001 standards for the development, hosting and support of open source software, data services and data-analysis[…]
[ Read more ]

FAIR data is here to stay, but where is the tooling?

November 17, 2017 | By Jarno van Erp 0
On the 8th of November 2017 we attended the FAIR data tooling meeting organized mainly for developers interested/involved in FAIR. We were invited to present about what we currently do and what we need from the community to increase the FAIRness of[…]
[ Read more ]

The OHDSI Symposium 2017: mastering the art of collaborative real world data research

November 01, 2017 | By Maxim Moinat 0
Almost 400 attendees from all over the world, came together during the annual OHDSI symposium, to discuss the progress of the OHDSI platform. From The Hyve, Kees and I attended. During the symposium I gave a talk on the transformation of Swedish EHR[…]
[ Read more ]

RADAR-CNS Annual Meeting

October 26, 2017 | By Carolyn Langen 0
     
[ Read more ]

The Hyve present at the Annual OHDSI Symposium 2017

October 18, 2017 | By Maxim Moinat 0
[ Read more ]

Archiving in a FAIR way, an Overview of Data Archive Costs

September 01, 2017 | By Jarno van Erp 0
One of the most underestimated parts about a FAIR data management plan is archiving your data. How am I going to store my data in such a way that people can access, download and share it? And what are the data archive costs included for storing your[…]
[ Read more ]